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This is a list of rivers of Bosnia and Herzegovina ordered alphabetically.

• Glina (right tributary to Kupa)
  • Glinica (right tributary)
    • Bojna
    • Bužimica
  • Kladušnica (right tributary in Velika Kladuša)
• Korana (right tributary to Kupa)
  • Mutnica (Korana) (right tributary)
• Sava (right tributary of the Danube)
  • Bosna (right tributary)
    • Babina rijeka (right tributary near/in Zenica)
    • Fojnička rijeka (left tributary)
      • Lepenica (Fojnička rijeka) (left tributary)
        • Bijela rijeka (Lepenica) (right tributary near Kreševo)
        • Crna rijeka (Lepenica) (right tributary near Kreševo)
        • Kreševka (right tributary in Kreševo)
      • Željeznica (Fojnička rijeka) (right tributary)
        • Dragača (left tributary in Fojnica)
    • Goruša (right tributary in Visoko)
    • Krivaja (right tributary in Zavidovići)
      • Stupčanica (source of the Krivaja (in confluence with the Bioštica) and right tributary in Olovo)
      • Bioštica (source of the Krivaja (in confluence with the Stupčanica) and left tributary in Olovo)
        • Kaljina (left tributary)
      • Orlja (left tributary)
      • Tribija (left tributary)
        • Vijaka (left tributary)
      • Duboštica (left tributary)
      • Župeljeva (right tributary)
        • Mala Maoča (left tributary)
      • Velika Maoča (right tributary)
    • Lašva (left tributary)
      • Bila (left tributary)
      • Grlovnica (right tributary)
      • Komašnica (right tributary near Travnik)
      • Kruščica (right tributary)
    • Ljubina (Bosna) (right tributary in Semizovac)
    • Miljacka (right tributary)
      • Mokranjska Miljacka (right tributary)
      • Koševski Potok (right tributary)
      • Paljanska Miljacka (left tributary)
        • Bistrica (Paljanska Miljacka) (left tributary)
    • Misoča (right tributary)
      • Blaža (left tributary)
    • Ribnica (right tributary near Kakanj)
      • Mala rijeka (Ribnica) (left tributary near Kakanj)
    • Stavnja (left tributary in Ilijaš)
      • Mala rijeka (Stavnja) (left tributary)
    • Trstionica (right tributary near Kakanj)
      • Bukovica (Trstionica) (left tributary near Kraljeva Sutjeska)
    • Usora (left tributary south of Doboj)
      • Mala Usora
      • Velika Usora
    • Željeznica (right tributary)
      • Crna rijeka (Bosna)
      • Kasindolska (right tributary)
  • Brka (right tributary in Brčko)
  • Dašnica (right tributary in Semberija)
  • Drina (right tributary)
    • Piva (source of the Drina (in confluence with Tara) and left tributary)
    • Tara (source of the Drina (in confluence with Piva) and right tributary)
    • Ćehotina (right tributary)
    • Bistrica (Drina) (left tributary)
      • Govza (right tributary)
    • Prača (left tributary)
      • Rakitnica (Prača) (left tributary)
    • Drinjača (left tributary)
      • Jadar (right tributary)
        • Kravica (right tributary)
    • Janja (left tributary in Semberija)
    • Janjina (right tributary)
    • Kolina (left tributary)
    • Lim (right tributary)
    • Rzav (right tributary in Višegrad)
      • Beli Rzav
      • Crni Rzav
    • Sutjeska (left tributary south from Foča)
      • Hrčavka (left tributary)
  • Jablanica (right tributary near Bosanska Gradiška)
    • Bukovica (Jablanica) (right tributary)
    • Ljubina (Jablanica) (right tributary)
  • Jurkovica (right tributary near Bosanska Gradiška)
  • Lukavac (right tributary in Semberija)
  • Ljubija (left tributary)
  • Ukrina (right tributary near Bosanski Brod)
    • Ilova (right tributary)
    • Mala Ukrina
    • Velika Ukrina
  • Una (right tributary)
    • Srebrenica (right tributary)
    • Krka (right tributary)
    • Unac (right tributary)
    • Čava (right tributary)
    • Klokot (left tributary)
    • Krušnica (right tributary in Bosanska Krupa)
    • Mlječanica (right tributary)
      • Knežica (left tributary)
    • Sana (right tributary)
      • Blija (left tributary in Sanski Most)
      • Dabar (left tributary south from Sanski Most)
      • Gomjenica (right tributary near Prijedor)
        • Bistrica (Gomjenica) (right tributary)
        • Krivaja (Gomjenica) (right tributary)
      • Japra (left tributary near Bosanski Novi)
        • Japrica (left tributary)
      • Kijevska rijeka (right tributary)
      • Kozica (right tributary)
        • Jovica (right tributary)
    • Strigova (right tributary)
      • Kriva rijeka (right tributary)
      • Mekinja (left tributary)
  • Vrbas (right tributary)
    • Bistrica (Vrbas) (right tributary near Gornji Vakuf)
      • Mutnica (Bistrica) (left tributary)
    • Bunta (left tributary between Gornji Vakuf and Bugojno)
    • Crna rijeka (Vrbas) (left tributary in Mrkonjić Grad)
    • Desna (left tributary before Gornji Vakuf)
    • Dragočaj (left tributary north of Banja Luka)
    • Duboka (left tributary in Bugojno)
    • Pliva (right tributary in Jajce)
      • Janj (right tributary)
        • Kupreška rijeka (right tributary)
    • Ugar (right tributary downflow of Jajce)
      • Ilomska (right tributary downflow of Vitovlje), Travnik
        • Crna rijeka (Ilomska) (left tributary below Petrovo polje)
        • Mala Ilomska (right tributary below Petrovo Polje)
        • Manatovac (right tributary on Vlašić slopes)
      • Kobilja (right tributary below Imljani), downflow from mouth of Ilomska
      • Pljačkovac (right tributary nearby Vitovlje), Travnik
    • Vrbanja (right tributary in Banja Luka)
      • Bobovica (right tributary in Kruševo Brdo)
      • Bosanka (right tributary in Vrbanjci)
      • Crkvenica (right tributary in Šiprage)
      • Cvrcka (left tributary nearby Vrbanjci)
      • Čudnić (left tributary in Kruševo Brdo)
      • Ćorkovac (left tributary in Šiprage)
      • Demićka (left tributary in Šiprage)
      • Duboka (left tributary near Grabovica)
      • Grabovička rijeka (left tributary in Grabovica), Kotor Varoš
      • Jakotina (left tributary in Kotor Varoš)
      • Jezerka (right tributary nearby Vrbanjci)
      • Jošavka (right tributary in Čelinac)
      • Kruševica (right tributary in Obodnik)
      • Sadika (left tributary downflow from Šiprage)
      • Vigošća/Vigošta (right tributary in Obodnik)
    • Vrbaška (right tributary)
      • Crna rijeka (Vrbaška) (left tributary)

• Neretva
  • Blučica (right tributary near Jablanica lake)
  • Bregava (left tributary near Stolac and Čapljina)
  • Trebižat (right tributary near Čapljina)
  • Buna (left tributary near Buna)
    • Bunica (left tributary)
  • Doljanka (right tributary in Jablanica)
  • Drežanka (right tributary)
  • Jezernica (right tributary)
  • Kraljuščica (right tributary)
  • Neretvica (right tributary near Konjic)

• Mande, into Buško Lake

• Bijela (west side of Prenj mountain)
• Plovuča (in Livno field)
  • Bistrica (Livno) (in Livno field)
    • Sturba
  • Žabljak (in Livno field)
• Drina (Duvno field) (in Duvno field)
• Jaruga (in Livno field)
• Jaruga (in Glamoč field)
• Lištica (near Široki Brijeg)
• Milač (in Kupres field)
• Mrtvica (in Kupres field)
• Mušnica (in Gatačko field)
• Vrljika (in Imotski field)
  • Matica (left tributary)